Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015810256.1_cds_XP_016496120.1_10373
CDS Infomation

[gene=LOC107815119] [db_xref=GeneID:107815119] [protein=pentatricopeptide repeat-containing protein At3g62890] [protein_id=XP_016496120.1] [location=complement(5116..6465)] [gbkey=CDS]
Sequence

ATGCAGGTGTCGACCAGAAAGCTCATATCTTTAACGCACCCTTCTCTCAATCTTTCACAT
CCAACTGTTGAATCTTTCGTTTGGAATACTCTGATCAGAGCCCATGTCCAACGAACTCAT
CCACCTACCACCCAATCCCACACCCCGCTCTCCATCTTCCTCCGAATGCGCTTCCATGGT
GTCCAACTTGATTACTACACCTTCCCTTTTCTCCTCCACTCCGTCCATTCTCCTTCACAT
CTCCAATTGGGGCGATTAATTCATTCACAGTCTATTCTTTTTGGTTTCTCATTCGACCCA
TTTGTCCAAACTTCGCTAATTAGTATGTATACCGCTTGCGGCAATGTGGGTTCTGCCCGA
AGAGTGTTTGATGAAATGCCTCAACCGGATTTACCTTCGTGGAATTCCATCATGAATGCG
AATGTCAAAGCTGGTTTGCTAAGCGTTGCGCGCGAATTGTTTGATAAAATGCCAAGTAGA
AATGTTATATCTTGGAGTAGTATGTTGGATGGTTACGTGAGGTGGGGTCAGTGTGAAGAA
GCATTGGTGTTGTTTAGTCAGATGCAAGAGGAAAATAAAGTTACGCCTAACGAGTACACC
ATGTCTATTTTGGTTGCAGCATGTGAGCAGTTGGGTTCACTTGAACATGGGAAATGGGCT
CATGCTTACGTATACAAACTTGGGATGGATATTAATGTTGTACTTGGAACTTCTTTGATT
GAAATGTATGCTAAATGTGGGAGTATCGTCAGGGCAAGATTAGTTTTCGAAAATTTGGGT
CCAAAGAAAGACTTAATGGCTTGGAGTGCAATGATCTCAGGCCTCGCGATGCATGGTCGC
TGGGAAGATTGCCTCCGTTTGTTCTCAAATATGGTTGATAACGGAGTAAGGCCTGATGAC
ATCACATTCTTAGGTGTACTTTCTGCTTGTGTGCATGGAGGATTGGTGAGGCAAGGGAAG
GAAATGTTTGAGAGGATCAGTAAAGAGTTTGGTATTTCTCCTTCGGTTCAGCATTATGGT
TGTATGATTGACCTTTATGGAAGAGCTGGTCTGATTAATGAAGCATGGAATCTTGTGAAT
ACAATGCCTATGGAGCCAGATGTGCTTATTTGGGGAGCGCTTCTCAGTGGAGCCAGGATA
TGTGGAGATATTGAAACATGTGAGGTTGCACTCAACAAAATAATAAAGCTAGATCCCACA
AATAGTGCTGCTTATGTTCTTCTCTCCAATGTCTACGCTAAGATGGGTCGGTGGAAAGAT
GCTAGGCACATCAGAAACCTTATGGAGACAAAGAGGGTAAAGAAAGTTCCTGGGCTCAGT
TCCATAGAGGTCGATGGACGCATTCGCTAG

Peptide Sequence

PEP ID

XP_016496120.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At3g62890 [Nicotiana tabacum]
Sequence

MQVSTRKLISLTHPSLNLSHPTVESFVWNTLIRAHVQRTHPPTTQSHTPLSIFLRMRFHG
VQLDYYTFPFLLHSVHSPSHLQLGRLIHSQSILFGFSFDPFVQTSLISMYTACGNVGSAR
RVFDEMPQPDLPSWNSIMNANVKAGLLSVARELFDKMPSRNVISWSSMLDGYVRWGQCEE
ALVLFSQMQEENKVTPNEYTMSILVAACEQLGSLEHGKWAHAYVYKLGMDINVVLGTSLI
EMYAKCGSIVRARLVFENLGPKKDLMAWSAMISGLAMHGRWEDCLRLFSNMVDNGVRPDD
ITFLGVLSACVHGGLVRQGKEMFERISKEFGISPSVQHYGCMIDLYGRAGLINEAWNLVN
TMPMEPDVLIWGALLSGARICGDIETCEVALNKIIKLDPTNSAAYVLLSNVYAKMGRWKD
ARHIRNLMETKRVKKVPGLSSIEVDGRIR

Transcript Sequence

Gene sequence data has not been registered.